Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx4Q7TNK1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx4Q7TNK1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx4Q7TNK1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx4Q7TNK1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfx4Q7TNK1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx4Q7TNK1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx4Q7TNK1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx4Q7TNK1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Gm10420-201ENSMUST00000121713 882 ntBASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx4Q7TNK1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms