Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rif1Q6PR54 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.84■□□□□ 0.29
Rif1Q6PR54 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rif1Q6PR54 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rif1Q6PR54 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Gm44771-201ENSMUST00000206975 626 ntBASIC16.82■□□□□ 0.28
Rif1Q6PR54 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rif1Q6PR54 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rif1Q6PR54 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.8■□□□□ 0.28
Rif1Q6PR54 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.8■□□□□ 0.28
Rif1Q6PR54 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.8■□□□□ 0.28
Rif1Q6PR54 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.8■□□□□ 0.28
Rif1Q6PR54 Gm26524-201ENSMUST00000192339 390 ntBASIC16.8■□□□□ 0.28
Rif1Q6PR54 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.79■□□□□ 0.28
Rif1Q6PR54 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.79■□□□□ 0.28
Rif1Q6PR54 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.79■□□□□ 0.28
Rif1Q6PR54 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rif1Q6PR54 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rif1Q6PR54 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Ank2-226ENSMUST00000189368 339 ntBASIC16.78■□□□□ 0.28
Rif1Q6PR54 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Gm7461-201ENSMUST00000058918 827 ntBASIC16.78■□□□□ 0.28
Rif1Q6PR54 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rif1Q6PR54 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rif1Q6PR54 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rif1Q6PR54 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rif1Q6PR54 Dio3-201ENSMUST00000097228 1449 ntBASIC16.77■□□□□ 0.27
Rif1Q6PR54 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rif1Q6PR54 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms