Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rad54bQ6PFE3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rad54bQ6PFE3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.98■□□□□ 0.79
Rad54bQ6PFE3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rad54bQ6PFE3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rad54bQ6PFE3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rad54bQ6PFE3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rad54bQ6PFE3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rad54bQ6PFE3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rad54bQ6PFE3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rad54bQ6PFE3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Etf1-202ENSMUST00000180351 108 ntBASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rad54bQ6PFE3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rad54bQ6PFE3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms