Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chd4Q6PDQ2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.39■■□□□ 1.81
Chd4Q6PDQ2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
Chd4Q6PDQ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Chd4Q6PDQ2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.38■■□□□ 1.81
Chd4Q6PDQ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chd4Q6PDQ2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Chd4Q6PDQ2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC26.36■■□□□ 1.81
Chd4Q6PDQ2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Chd4Q6PDQ2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Chd4Q6PDQ2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Chd4Q6PDQ2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Chd4Q6PDQ2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chd4Q6PDQ2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Chd4Q6PDQ2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Gm12933-201ENSMUST00000120203 872 ntBASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chd4Q6PDQ2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Chd4Q6PDQ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chd4Q6PDQ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chd4Q6PDQ2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Chd4Q6PDQ2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chd4Q6PDQ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Chd4Q6PDQ2 Gm13148-201ENSMUST00000118892 745 ntBASIC26.3■■□□□ 1.8
Chd4Q6PDQ2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chd4Q6PDQ2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chd4Q6PDQ2 Gm12669-201ENSMUST00000122162 1009 ntBASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chd4Q6PDQ2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chd4Q6PDQ2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chd4Q6PDQ2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chd4Q6PDQ2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chd4Q6PDQ2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chd4Q6PDQ2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Chd4Q6PDQ2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Chd4Q6PDQ2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC26.27■■□□□ 1.8
Chd4Q6PDQ2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Chd4Q6PDQ2 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.27■■□□□ 1.8
Chd4Q6PDQ2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Chd4Q6PDQ2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms