Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.12■■□□□ 1.13
Abcf1Q6P542 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Abcf1Q6P542 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.1■■□□□ 1.13
Abcf1Q6P542 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abcf1Q6P542 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.09■■□□□ 1.13
Abcf1Q6P542 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Abcf1Q6P542 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Abcf1Q6P542 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Abcf1Q6P542 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.08■■□□□ 1.13
Abcf1Q6P542 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Abcf1Q6P542 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Abcf1Q6P542 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Abcf1Q6P542 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.07■■□□□ 1.12
Abcf1Q6P542 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abcf1Q6P542 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.06■■□□□ 1.12
Abcf1Q6P542 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abcf1Q6P542 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Abcf1Q6P542 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Abcf1Q6P542 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.05■■□□□ 1.12
Abcf1Q6P542 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.05■■□□□ 1.12
Abcf1Q6P542 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.04■■□□□ 1.12
Abcf1Q6P542 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcf1Q6P542 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abcf1Q6P542 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.03■■□□□ 1.12
Abcf1Q6P542 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abcf1Q6P542 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Gm22238-201ENSMUST00000175222 88 ntBASIC22.02■■□□□ 1.12
Abcf1Q6P542 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Abcf1Q6P542 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abcf1Q6P542 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abcf1Q6P542 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abcf1Q6P542 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abcf1Q6P542 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Abcf1Q6P542 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms