Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt42Q6IFX2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt42Q6IFX2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt42Q6IFX2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt42Q6IFX2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt42Q6IFX2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt42Q6IFX2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Krt42Q6IFX2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.3■□□□□ 0.84
Krt42Q6IFX2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Krt42Q6IFX2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Krt42Q6IFX2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms