Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga7Q6DD96 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga7Q6DD96 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Gm9870-201ENSMUST00000063874 645 ntBASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga7Q6DD96 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga7Q6DD96 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga7Q6DD96 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Gm15546-201ENSMUST00000122095 826 ntBASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Gm7417-201ENSMUST00000192950 473 ntBASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga7Q6DD96 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhga7Q6DD96 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhga7Q6DD96 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhga7Q6DD96 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Gm43530-201ENSMUST00000195920 274 ntBASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga7Q6DD96 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga7Q6DD96 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Mir6236-201ENSMUST00000184437 123 ntBASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga7Q6DD96 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdhga7Q6DD96 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms