Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col11a2Q64739 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a2Q64739 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a2Q64739 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Col11a2Q64739 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.59■■□□□ 1.53
Col11a2Q64739 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a2Q64739 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.58■■□□□ 1.53
Col11a2Q64739 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Col11a2Q64739 Gm20049-201ENSMUST00000219950 730 ntBASIC24.58■■□□□ 1.53
Col11a2Q64739 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a2Q64739 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a2Q64739 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a2Q64739 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Col11a2Q64739 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a2Q64739 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Col11a2Q64739 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a2Q64739 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.57■■□□□ 1.52
Col11a2Q64739 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.57■■□□□ 1.52
Col11a2Q64739 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.57■■□□□ 1.52
Col11a2Q64739 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Col11a2Q64739 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a2Q64739 Gm37856-201ENSMUST00000191634 999 ntBASIC24.56■■□□□ 1.52
Col11a2Q64739 Gm38205-201ENSMUST00000192243 258 ntBASIC24.56■■□□□ 1.52
Col11a2Q64739 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.56■■□□□ 1.52
Col11a2Q64739 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a2Q64739 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a2Q64739 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a2Q64739 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Col11a2Q64739 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a2Q64739 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Col11a2Q64739 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a2Q64739 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a2Q64739 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a2Q64739 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a2Q64739 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.55■■□□□ 1.52
Col11a2Q64739 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a2Q64739 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.54■■□□□ 1.52
Col11a2Q64739 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a2Q64739 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a2Q64739 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm7290-201ENSMUST00000104990 617 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm12918-201ENSMUST00000120234 636 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm15710-201ENSMUST00000121821 636 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm6420-201ENSMUST00000193885 723 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Gm5075-201ENSMUST00000196916 622 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col11a2Q64739 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.53■■□□□ 1.52
Col11a2Q64739 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Col11a2Q64739 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.52■■□□□ 1.52
Col11a2Q64739 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a2Q64739 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a2Q64739 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a2Q64739 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a2Q64739 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a2Q64739 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a2Q64739 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
Col11a2Q64739 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a2Q64739 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a2Q64739 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a2Q64739 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.51■■□□□ 1.51
Col11a2Q64739 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a2Q64739 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a2Q64739 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.5■■□□□ 1.51
Col11a2Q64739 Gm22325-201ENSMUST00000158904 308 ntBASIC24.5■■□□□ 1.51
Col11a2Q64739 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.5■■□□□ 1.51
Col11a2Q64739 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a2Q64739 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a2Q64739 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a2Q64739 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a2Q64739 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Col11a2Q64739 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a2Q64739 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Col11a2Q64739 Gm10812-201ENSMUST00000099864 546 ntBASIC24.49■■□□□ 1.51
Col11a2Q64739 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.48■■□□□ 1.51
Col11a2Q64739 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.48■■□□□ 1.51
Col11a2Q64739 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col11a2Q64739 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Col11a2Q64739 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col11a2Q64739 Trmt13-210ENSMUST00000198454 880 ntBASIC24.47■■□□□ 1.51
Col11a2Q64739 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col11a2Q64739 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms