Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sdc3Q64519 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sdc3Q64519 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc3Q64519 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sdc3Q64519 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.97■□□□□ 0.63
Sdc3Q64519 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.97■□□□□ 0.63
Sdc3Q64519 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.97■□□□□ 0.63
Sdc3Q64519 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc3Q64519 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sdc3Q64519 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Sdc3Q64519 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Sdc3Q64519 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.96■□□□□ 0.63
Sdc3Q64519 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.96■□□□□ 0.63
Sdc3Q64519 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.96■□□□□ 0.63
Sdc3Q64519 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Sdc3Q64519 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc3Q64519 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.95■□□□□ 0.62
Sdc3Q64519 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.95■□□□□ 0.62
Sdc3Q64519 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc3Q64519 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Sdc3Q64519 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Gm43173-201ENSMUST00000202246 593 ntBASIC18.94■□□□□ 0.62
Sdc3Q64519 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sdc3Q64519 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc3Q64519 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.94■□□□□ 0.62
Sdc3Q64519 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.93■□□□□ 0.62
Sdc3Q64519 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sdc3Q64519 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc3Q64519 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sdc3Q64519 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.92■□□□□ 0.62
Sdc3Q64519 Spcs1-204ENSMUST00000226782 949 ntBASIC18.92■□□□□ 0.62
Sdc3Q64519 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc3Q64519 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc3Q64519 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sdc3Q64519 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sdc3Q64519 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms