Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.18■□□□□ 0.5
Cd53Q61451 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.18■□□□□ 0.5
Cd53Q61451 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cd53Q61451 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cd53Q61451 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd53Q61451 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Cd53Q61451 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd53Q61451 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd53Q61451 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.17■□□□□ 0.5
Cd53Q61451 Gm40881-201ENSMUST00000223397 166 ntBASIC18.17■□□□□ 0.5
Cd53Q61451 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd53Q61451 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd53Q61451 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cd53Q61451 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd53Q61451 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.16■□□□□ 0.5
Cd53Q61451 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd53Q61451 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd53Q61451 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.16■□□□□ 0.5
Cd53Q61451 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd53Q61451 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd53Q61451 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd53Q61451 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd53Q61451 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd53Q61451 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd53Q61451 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd53Q61451 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cd53Q61451 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd53Q61451 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd53Q61451 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd53Q61451 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cd53Q61451 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.14■□□□□ 0.5
Cd53Q61451 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd53Q61451 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cd53Q61451 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.14■□□□□ 0.49
Cd53Q61451 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.14■□□□□ 0.49
Cd53Q61451 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd53Q61451 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.13■□□□□ 0.49
Cd53Q61451 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cd53Q61451 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Gm12922-201ENSMUST00000120626 809 ntBASIC18.13■□□□□ 0.49
Cd53Q61451 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.13■□□□□ 0.49
Cd53Q61451 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd53Q61451 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd53Q61451 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd53Q61451 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd53Q61451 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd53Q61451 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.12■□□□□ 0.49
Cd53Q61451 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd53Q61451 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd53Q61451 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd53Q61451 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Gm12821-201ENSMUST00000120022 600 ntBASIC18.11■□□□□ 0.49
Cd53Q61451 Gm27454-201ENSMUST00000185090 204 ntBASIC18.11■□□□□ 0.49
Cd53Q61451 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cd53Q61451 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.1■□□□□ 0.49
Cd53Q61451 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd53Q61451 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms