Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hif1aQ61221 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hif1aQ61221 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hif1aQ61221 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.96■□□□□ 0.79
Hif1aQ61221 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Gm7143-201ENSMUST00000222811 859 ntBASIC19.96■□□□□ 0.79
Hif1aQ61221 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Hif1aQ61221 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hif1aQ61221 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Hif1aQ61221 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.95■□□□□ 0.78
Hif1aQ61221 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.95■□□□□ 0.78
Hif1aQ61221 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.95■□□□□ 0.78
Hif1aQ61221 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hif1aQ61221 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.95■□□□□ 0.78
Hif1aQ61221 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hif1aQ61221 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hif1aQ61221 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.94■□□□□ 0.78
Hif1aQ61221 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hif1aQ61221 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Hif1aQ61221 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.93■□□□□ 0.78
Hif1aQ61221 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hif1aQ61221 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.93■□□□□ 0.78
Hif1aQ61221 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hif1aQ61221 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hif1aQ61221 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.92■□□□□ 0.78
Hif1aQ61221 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.92■□□□□ 0.78
Hif1aQ61221 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.92■□□□□ 0.78
Hif1aQ61221 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hif1aQ61221 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.91■□□□□ 0.78
Hif1aQ61221 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.91■□□□□ 0.78
Hif1aQ61221 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Hif1aQ61221 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hif1aQ61221 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hif1aQ61221 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hif1aQ61221 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.9■□□□□ 0.78
Hif1aQ61221 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
Hif1aQ61221 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hif1aQ61221 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hif1aQ61221 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hif1aQ61221 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Hif1aQ61221 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hif1aQ61221 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hif1aQ61221 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hif1aQ61221 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hif1aQ61221 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hif1aQ61221 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hif1aQ61221 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hif1aQ61221 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.88■□□□□ 0.77
Hif1aQ61221 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hif1aQ61221 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hif1aQ61221 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hif1aQ61221 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hif1aQ61221 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hif1aQ61221 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms