Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav6-2Q5R1I4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-2Q5R1I4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-2Q5R1I4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6-2Q5R1I4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6-2Q5R1I4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6-2Q5R1I4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-2Q5R1I4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-2Q5R1I4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-2Q5R1I4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-2Q5R1I4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-2Q5R1I4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms