Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-3Q5R1C3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-3Q5R1C3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-3Q5R1C3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-3Q5R1C3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-3Q5R1C3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Gm6311-201ENSMUST00000073790 878 ntBASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-3Q5R1C3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-3Q5R1C3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms