Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm5408-201ENSMUST00000197998 747 ntBASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-2Q5R1B6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Gm12527-201ENSMUST00000117967 564 ntBASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Gm10252-201ENSMUST00000209541 832 ntBASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav8d-2Q5R1B6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-2Q5R1B6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-2Q5R1B6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav8d-2Q5R1B6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Gm6365-201ENSMUST00000054711 744 ntBASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trav8d-2Q5R1B6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-2Q5R1B6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm13148-201ENSMUST00000118892 745 ntBASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav8d-2Q5R1B6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8d-2Q5R1B6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.41■□□□□ 0.7
Trav8d-2Q5R1B6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav8d-2Q5R1B6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trav8d-2Q5R1B6 Gm13168-201ENSMUST00000121771 632 ntBASIC19.41■□□□□ 0.7
Trav8d-2Q5R1B6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.41■□□□□ 0.7
Trav8d-2Q5R1B6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-2Q5R1B6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav8d-2Q5R1B6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms