Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cnga4Q3UW12 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cnga4Q3UW12 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cnga4Q3UW12 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cnga4Q3UW12 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnga4Q3UW12 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnga4Q3UW12 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnga4Q3UW12 Gm10420-201ENSMUST00000121713 882 ntBASIC20.07■□□□□ 0.8
Cnga4Q3UW12 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cnga4Q3UW12 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cnga4Q3UW12 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Cnga4Q3UW12 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.04■□□□□ 0.8
Cnga4Q3UW12 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cnga4Q3UW12 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.04■□□□□ 0.8
Cnga4Q3UW12 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cnga4Q3UW12 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Cnga4Q3UW12 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cnga4Q3UW12 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnga4Q3UW12 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cnga4Q3UW12 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cnga4Q3UW12 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cnga4Q3UW12 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnga4Q3UW12 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20■□□□□ 0.79
Cnga4Q3UW12 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20■□□□□ 0.79
Cnga4Q3UW12 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20■□□□□ 0.79
Cnga4Q3UW12 Golph3-205ENSMUST00000228671 2842 ntBASIC20■□□□□ 0.79
Cnga4Q3UW12 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnga4Q3UW12 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Cnga4Q3UW12 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms