Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa3Q3UPR0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa3Q3UPR0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa3Q3UPR0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Shisa3Q3UPR0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.08■□□□□ 0.32
Shisa3Q3UPR0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa3Q3UPR0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Shisa3Q3UPR0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa3Q3UPR0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa3Q3UPR0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Shisa3Q3UPR0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa3Q3UPR0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa3Q3UPR0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa3Q3UPR0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa3Q3UPR0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.02■□□□□ 0.31
Shisa3Q3UPR0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa3Q3UPR0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa3Q3UPR0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.02■□□□□ 0.31
Shisa3Q3UPR0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms