Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.3■■□□□ 1
Smcr8Q3UMB5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smcr8Q3UMB5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smcr8Q3UMB5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Smcr8Q3UMB5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Smcr8Q3UMB5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.28■■□□□ 1
Smcr8Q3UMB5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smcr8Q3UMB5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smcr8Q3UMB5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Smcr8Q3UMB5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.27■■□□□ 1
Smcr8Q3UMB5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.27■■□□□ 1
Smcr8Q3UMB5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smcr8Q3UMB5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smcr8Q3UMB5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Gm10493-201ENSMUST00000097270 612 ntBASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Smcr8Q3UMB5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smcr8Q3UMB5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smcr8Q3UMB5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smcr8Q3UMB5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.22■□□□□ 0.99
Smcr8Q3UMB5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Gm11421-201ENSMUST00000122124 294 ntBASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Smcr8Q3UMB5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms