Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Gm43530-201ENSMUST00000195920 274 ntBASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc4Q3TCX3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.77■□□□□ 0.6
Khdc4Q3TCX3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc4Q3TCX3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Khdc4Q3TCX3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc4Q3TCX3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc4Q3TCX3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc4Q3TCX3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Khdc4Q3TCX3 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc4Q3TCX3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.72■□□□□ 0.59
Khdc4Q3TCX3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Spcs1-204ENSMUST00000226782 949 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms