Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.44■□□□□ 0.7
Q3KNL4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q3KNL4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.43■□□□□ 0.7
Q3KNL4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Q3KNL4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q3KNL4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Q3KNL4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.42■□□□□ 0.7
Q3KNL4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.42■□□□□ 0.7
Q3KNL4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q3KNL4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Q3KNL4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Q3KNL4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.41■□□□□ 0.7
Q3KNL4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.41■□□□□ 0.7
Q3KNL4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Q3KNL4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q3KNL4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Q3KNL4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q3KNL4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q3KNL4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3KNL4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Q3KNL4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q3KNL4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q3KNL4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.39■□□□□ 0.69
Q3KNL4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Q3KNL4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Q3KNL4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.39■□□□□ 0.69
Q3KNL4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.39■□□□□ 0.69
Q3KNL4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q3KNL4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.39■□□□□ 0.69
Q3KNL4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Q3KNL4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Q3KNL4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Q3KNL4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Q3KNL4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.38■□□□□ 0.69
Q3KNL4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Q3KNL4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3KNL4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.37■□□□□ 0.69
Q3KNL4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.37■□□□□ 0.69
Q3KNL4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3KNL4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms