Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smn1P97801 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smn1P97801 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smn1P97801 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smn1P97801 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.95■□□□□ 0.3
Smn1P97801 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smn1P97801 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.95■□□□□ 0.3
Smn1P97801 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smn1P97801 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.95■□□□□ 0.3
Smn1P97801 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.94■□□□□ 0.3
Smn1P97801 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Smn1P97801 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.94■□□□□ 0.3
Smn1P97801 Gm45444-201ENSMUST00000211394 898 ntBASIC16.94■□□□□ 0.3
Smn1P97801 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smn1P97801 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Smn1P97801 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smn1P97801 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.93■□□□□ 0.3
Smn1P97801 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.93■□□□□ 0.3
Smn1P97801 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.93■□□□□ 0.3
Smn1P97801 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smn1P97801 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.93■□□□□ 0.3
Smn1P97801 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smn1P97801 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smn1P97801 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Smn1P97801 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smn1P97801 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smn1P97801 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.92■□□□□ 0.3
Smn1P97801 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.91■□□□□ 0.3
Smn1P97801 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.91■□□□□ 0.3
Smn1P97801 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smn1P97801 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smn1P97801 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smn1P97801 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Smn1P97801 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Smn1P97801 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.9■□□□□ 0.3
Smn1P97801 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smn1P97801 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Smn1P97801 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smn1P97801 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smn1P97801 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Smn1P97801 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.89■□□□□ 0.29
Smn1P97801 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms