Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.57■□□□□ 0.56
Cxcr4P70658 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.57■□□□□ 0.56
Cxcr4P70658 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcr4P70658 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcr4P70658 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Cxcr4P70658 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cxcr4P70658 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cxcr4P70658 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cxcr4P70658 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cxcr4P70658 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cxcr4P70658 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cxcr4P70658 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cxcr4P70658 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.54■□□□□ 0.56
Cxcr4P70658 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.54■□□□□ 0.56
Cxcr4P70658 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cxcr4P70658 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Cxcr4P70658 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.53■□□□□ 0.56
Cxcr4P70658 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.53■□□□□ 0.56
Cxcr4P70658 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcr4P70658 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcr4P70658 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.52■□□□□ 0.56
Cxcr4P70658 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcr4P70658 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cxcr4P70658 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcr4P70658 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.52■□□□□ 0.55
Cxcr4P70658 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcr4P70658 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcr4P70658 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
Cxcr4P70658 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcr4P70658 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.5■□□□□ 0.55
Cxcr4P70658 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cxcr4P70658 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.5■□□□□ 0.55
Cxcr4P70658 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcr4P70658 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcr4P70658 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcr4P70658 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cxcr4P70658 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcr4P70658 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcr4P70658 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.49■□□□□ 0.55
Cxcr4P70658 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcr4P70658 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcr4P70658 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcr4P70658 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcr4P70658 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcr4P70658 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.48■□□□□ 0.55
Cxcr4P70658 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms