Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rpl39P62892 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpl39P62892 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Rpl39P62892 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39P62892 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.09□□□□□ -0.15
Rpl39P62892 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpl39P62892 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39P62892 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl39P62892 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl39P62892 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl39P62892 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rpl39P62892 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.08□□□□□ -0.16
Rpl39P62892 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rpl39P62892 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl39P62892 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39P62892 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.07□□□□□ -0.16
Rpl39P62892 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl39P62892 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl39P62892 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39P62892 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.07□□□□□ -0.16
Rpl39P62892 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rpl39P62892 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rpl39P62892 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39P62892 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rpl39P62892 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.05□□□□□ -0.16
Rpl39P62892 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpl39P62892 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39P62892 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpl39P62892 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms