Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.03□□□□□ -0.16
Cks1bP61025 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cks1bP61025 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cks1bP61025 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cks1bP61025 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cks1bP61025 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.02□□□□□ -0.17
Cks1bP61025 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cks1bP61025 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cks1bP61025 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cks1bP61025 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cks1bP61025 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cks1bP61025 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cks1bP61025 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.01□□□□□ -0.17
Cks1bP61025 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cks1bP61025 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.01□□□□□ -0.17
Cks1bP61025 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cks1bP61025 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cks1bP61025 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cks1bP61025 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cks1bP61025 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cks1bP61025 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14□□□□□ -0.17
Cks1bP61025 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cks1bP61025 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cks1bP61025 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.99□□□□□ -0.17
Cks1bP61025 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.99□□□□□ -0.17
Cks1bP61025 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.99□□□□□ -0.17
Cks1bP61025 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.99□□□□□ -0.17
Cks1bP61025 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cks1bP61025 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.98□□□□□ -0.17
Cks1bP61025 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Cks1bP61025 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.98□□□□□ -0.17
Cks1bP61025 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cks1bP61025 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cks1bP61025 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cks1bP61025 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.97□□□□□ -0.17
Cks1bP61025 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cks1bP61025 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.97□□□□□ -0.17
Cks1bP61025 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cks1bP61025 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms