Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ddx6P54823 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx6P54823 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ddx6P54823 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx6P54823 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ddx6P54823 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx6P54823 Gm13234-201ENSMUST00000120010 747 ntBASIC20.23■□□□□ 0.83
Ddx6P54823 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ddx6P54823 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.23■□□□□ 0.83
Ddx6P54823 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ddx6P54823 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx6P54823 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx6P54823 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx6P54823 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Ddx6P54823 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx6P54823 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Ddx6P54823 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.22■□□□□ 0.83
Ddx6P54823 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx6P54823 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx6P54823 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx6P54823 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx6P54823 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx6P54823 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx6P54823 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx6P54823 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx6P54823 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx6P54823 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ddx6P54823 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.2■□□□□ 0.82
Ddx6P54823 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.2■□□□□ 0.82
Ddx6P54823 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Ddx6P54823 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx6P54823 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.19■□□□□ 0.82
Ddx6P54823 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx6P54823 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx6P54823 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx6P54823 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx6P54823 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.18■□□□□ 0.82
Ddx6P54823 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.18■□□□□ 0.82
Ddx6P54823 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx6P54823 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ddx6P54823 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 Reep4-203ENSMUST00000226563 1444 ntBASIC20.17■□□□□ 0.82
Ddx6P54823 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx6P54823 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ddx6P54823 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms