Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Atxn1P54254 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atxn1P54254 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atxn1P54254 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atxn1P54254 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Atxn1P54254 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Atxn1P54254 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.64■□□□□ 0.73
Atxn1P54254 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atxn1P54254 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atxn1P54254 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atxn1P54254 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atxn1P54254 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.63■□□□□ 0.73
Atxn1P54254 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Atxn1P54254 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atxn1P54254 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atxn1P54254 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.63■□□□□ 0.73
Atxn1P54254 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Atxn1P54254 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.62■□□□□ 0.73
Atxn1P54254 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atxn1P54254 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atxn1P54254 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atxn1P54254 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atxn1P54254 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atxn1P54254 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.61■□□□□ 0.73
Atxn1P54254 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.61■□□□□ 0.73
Atxn1P54254 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Gm9988-201ENSMUST00000069786 435 ntBASIC19.61■□□□□ 0.73
Atxn1P54254 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Atxn1P54254 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atxn1P54254 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.6■□□□□ 0.73
Atxn1P54254 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.6■□□□□ 0.73
Atxn1P54254 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.6■□□□□ 0.73
Atxn1P54254 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atxn1P54254 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atxn1P54254 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
Atxn1P54254 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atxn1P54254 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Atxn1P54254 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atxn1P54254 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atxn1P54254 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atxn1P54254 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Atxn1P54254 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Atxn1P54254 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atxn1P54254 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atxn1P54254 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Atxn1P54254 Gm11421-201ENSMUST00000122124 294 ntBASIC19.58■□□□□ 0.72
Atxn1P54254 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Gm20760-201ENSMUST00000179197 648 ntBASIC19.58■□□□□ 0.72
Atxn1P54254 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Atxn1P54254 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Atxn1P54254 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Atxn1P54254 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atxn1P54254 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atxn1P54254 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Atxn1P54254 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Atxn1P54254 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Atxn1P54254 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atxn1P54254 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atxn1P54254 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atxn1P54254 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.56■□□□□ 0.72
Atxn1P54254 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.56■□□□□ 0.72
Atxn1P54254 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atxn1P54254 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atxn1P54254 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Atxn1P54254 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atxn1P54254 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atxn1P54254 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atxn1P54254 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atxn1P54254 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Atxn1P54254 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Atxn1P54254 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.55■□□□□ 0.72
Atxn1P54254 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atxn1P54254 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms