Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.26■□□□□ 0.35
GdnfP48540 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GdnfP48540 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GdnfP48540 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GdnfP48540 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GdnfP48540 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GdnfP48540 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
GdnfP48540 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.24■□□□□ 0.35
GdnfP48540 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.24■□□□□ 0.35
GdnfP48540 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.24■□□□□ 0.35
GdnfP48540 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.24■□□□□ 0.35
GdnfP48540 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GdnfP48540 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.23■□□□□ 0.35
GdnfP48540 Gm10399-202ENSMUST00000202768 748 ntBASIC17.23■□□□□ 0.35
GdnfP48540 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.23■□□□□ 0.35
GdnfP48540 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GdnfP48540 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GdnfP48540 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GdnfP48540 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.22■□□□□ 0.35
GdnfP48540 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GdnfP48540 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GdnfP48540 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GdnfP48540 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GdnfP48540 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GdnfP48540 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.21■□□□□ 0.35
GdnfP48540 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GdnfP48540 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GdnfP48540 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GdnfP48540 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.2■□□□□ 0.34
GdnfP48540 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GdnfP48540 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GdnfP48540 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GdnfP48540 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GdnfP48540 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.19■□□□□ 0.34
GdnfP48540 Gm40881-201ENSMUST00000223397 166 ntBASIC17.19■□□□□ 0.34
GdnfP48540 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GdnfP48540 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GdnfP48540 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GdnfP48540 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GdnfP48540 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
GdnfP48540 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms