Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Gm10232-201ENSMUST00000089221 720 ntBASIC16.28■□□□□ 0.2
Hist1h1aP43275 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1aP43275 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hist1h1aP43275 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hist1h1aP43275 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Hist1h1aP43275 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1aP43275 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1aP43275 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.27■□□□□ 0.2
Hist1h1aP43275 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1aP43275 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
Hist1h1aP43275 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1aP43275 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hist1h1aP43275 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.26■□□□□ 0.19
Hist1h1aP43275 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.26■□□□□ 0.19
Hist1h1aP43275 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1aP43275 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.25■□□□□ 0.19
Hist1h1aP43275 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1aP43275 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1aP43275 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.23■□□□□ 0.19
Hist1h1aP43275 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h1aP43275 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hist1h1aP43275 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.22■□□□□ 0.19
Hist1h1aP43275 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist1h1aP43275 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hist1h1aP43275 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.21■□□□□ 0.19
Hist1h1aP43275 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms