Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdh4P39038 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdh4P39038 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdh4P39038 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cdh4P39038 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Cdh4P39038 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.92■□□□□ 0.62
Cdh4P39038 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh4P39038 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh4P39038 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh4P39038 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cdh4P39038 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdh4P39038 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cdh4P39038 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.91■□□□□ 0.62
Cdh4P39038 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdh4P39038 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh4P39038 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdh4P39038 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cdh4P39038 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.9■□□□□ 0.62
Cdh4P39038 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh4P39038 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh4P39038 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh4P39038 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh4P39038 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh4P39038 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.9■□□□□ 0.62
Cdh4P39038 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdh4P39038 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh4P39038 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Cdh4P39038 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh4P39038 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh4P39038 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdh4P39038 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.89■□□□□ 0.61
Cdh4P39038 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.89■□□□□ 0.61
Cdh4P39038 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh4P39038 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.88■□□□□ 0.61
Cdh4P39038 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Spcs1-204ENSMUST00000226782 949 ntBASIC18.88■□□□□ 0.61
Cdh4P39038 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cdh4P39038 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cdh4P39038 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh4P39038 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh4P39038 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh4P39038 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh4P39038 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
Cdh4P39038 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.87■□□□□ 0.61
Cdh4P39038 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.87■□□□□ 0.61
Cdh4P39038 Gm8493-201ENSMUST00000196881 489 ntBASIC18.87■□□□□ 0.61
Cdh4P39038 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh4P39038 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh4P39038 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cdh4P39038 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh4P39038 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh4P39038 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.86■□□□□ 0.61
Cdh4P39038 Gm6139-201ENSMUST00000079261 882 ntBASIC18.86■□□□□ 0.61
Cdh4P39038 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cdh4P39038 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cdh4P39038 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cdh4P39038 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh4P39038 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Gm12251-201ENSMUST00000117893 792 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms