Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Foxa1P35582 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Foxa1P35582 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxa1P35582 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
Foxa1P35582 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Foxa1P35582 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxa1P35582 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Foxa1P35582 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxa1P35582 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Foxa1P35582 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.35■□□□□ 0.53
Foxa1P35582 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Foxa1P35582 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxa1P35582 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.34■□□□□ 0.53
Foxa1P35582 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.34■□□□□ 0.53
Foxa1P35582 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.34■□□□□ 0.53
Foxa1P35582 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Gm12821-201ENSMUST00000120022 600 ntBASIC18.34■□□□□ 0.53
Foxa1P35582 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.34■□□□□ 0.53
Foxa1P35582 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.34■□□□□ 0.53
Foxa1P35582 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxa1P35582 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Foxa1P35582 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Foxa1P35582 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxa1P35582 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxa1P35582 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Foxa1P35582 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxa1P35582 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Foxa1P35582 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Foxa1P35582 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Foxa1P35582 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Gm27454-201ENSMUST00000185090 204 ntBASIC18.33■□□□□ 0.52
Foxa1P35582 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Foxa1P35582 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxa1P35582 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxa1P35582 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxa1P35582 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxa1P35582 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxa1P35582 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxa1P35582 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Foxa1P35582 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Foxa1P35582 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Foxa1P35582 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Foxa1P35582 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxa1P35582 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.31■□□□□ 0.52
Foxa1P35582 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Foxa1P35582 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.3■□□□□ 0.52
Foxa1P35582 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Foxa1P35582 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.3■□□□□ 0.52
Foxa1P35582 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxa1P35582 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxa1P35582 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.29■□□□□ 0.52
Foxa1P35582 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.29■□□□□ 0.52
Foxa1P35582 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Foxa1P35582 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxa1P35582 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Foxa1P35582 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxa1P35582 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxa1P35582 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxa1P35582 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.29■□□□□ 0.52
Foxa1P35582 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Foxa1P35582 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Foxa1P35582 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
Foxa1P35582 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Foxa1P35582 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Foxa1P35582 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Foxa1P35582 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Foxa1P35582 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxa1P35582 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Foxa1P35582 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxa1P35582 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Foxa1P35582 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxa1P35582 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.27■□□□□ 0.52
Foxa1P35582 Gm45417-201ENSMUST00000209533 758 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms