Protein–RNA interactions for Protein: P35460

Ly6f, Lymphocyte antigen 6F, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6fP35460 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.18■□□□□ 0.66
Ly6fP35460 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ly6fP35460 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.18■□□□□ 0.66
Ly6fP35460 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ly6fP35460 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.17■□□□□ 0.66
Ly6fP35460 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.17■□□□□ 0.66
Ly6fP35460 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ly6fP35460 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Ly6fP35460 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ly6fP35460 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ly6fP35460 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.16■□□□□ 0.66
Ly6fP35460 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ly6fP35460 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Gm13234-201ENSMUST00000120010 747 ntBASIC19.16■□□□□ 0.66
Ly6fP35460 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
Ly6fP35460 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
Ly6fP35460 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ly6fP35460 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ly6fP35460 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ly6fP35460 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ly6fP35460 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ly6fP35460 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ly6fP35460 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.15■□□□□ 0.66
Ly6fP35460 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ly6fP35460 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ly6fP35460 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.15■□□□□ 0.66
Ly6fP35460 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.14■□□□□ 0.65
Ly6fP35460 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ly6fP35460 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Ly6fP35460 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ly6fP35460 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Ly6fP35460 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.13■□□□□ 0.65
Ly6fP35460 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.13■□□□□ 0.65
Ly6fP35460 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.13■□□□□ 0.65
Ly6fP35460 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.13■□□□□ 0.65
Ly6fP35460 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ly6fP35460 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ly6fP35460 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ly6fP35460 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ly6fP35460 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ly6fP35460 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ly6fP35460 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ly6fP35460 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ly6fP35460 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ly6fP35460 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Ly6fP35460 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ly6fP35460 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ly6fP35460 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.12■□□□□ 0.65
Ly6fP35460 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ly6fP35460 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.11■□□□□ 0.65
Ly6fP35460 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ly6fP35460 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ly6fP35460 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ly6fP35460 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ly6fP35460 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ly6fP35460 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ly6fP35460 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ly6fP35460 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ly6fP35460 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.09■□□□□ 0.65
Ly6fP35460 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.09■□□□□ 0.65
Ly6fP35460 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ly6fP35460 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms