Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RxrbP28704 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RxrbP28704 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.95■□□□□ 0.78
RxrbP28704 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RxrbP28704 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RxrbP28704 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.94■□□□□ 0.78
RxrbP28704 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.94■□□□□ 0.78
RxrbP28704 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.94■□□□□ 0.78
RxrbP28704 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
RxrbP28704 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RxrbP28704 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.93■□□□□ 0.78
RxrbP28704 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.93■□□□□ 0.78
RxrbP28704 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RxrbP28704 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RxrbP28704 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RxrbP28704 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RxrbP28704 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.92■□□□□ 0.78
RxrbP28704 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RxrbP28704 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RxrbP28704 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RxrbP28704 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RxrbP28704 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Gm43566-201ENSMUST00000196851 808 ntBASIC19.91■□□□□ 0.78
RxrbP28704 Gm5921-201ENSMUST00000075898 882 ntBASIC19.91■□□□□ 0.78
RxrbP28704 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RxrbP28704 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RxrbP28704 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RxrbP28704 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RxrbP28704 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RxrbP28704 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RxrbP28704 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.89■□□□□ 0.78
RxrbP28704 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RxrbP28704 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.89■□□□□ 0.77
RxrbP28704 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.89■□□□□ 0.77
RxrbP28704 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RxrbP28704 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RxrbP28704 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RxrbP28704 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RxrbP28704 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RxrbP28704 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RxrbP28704 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
RxrbP28704 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.88■□□□□ 0.77
RxrbP28704 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.88■□□□□ 0.77
RxrbP28704 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.88■□□□□ 0.77
RxrbP28704 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RxrbP28704 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RxrbP28704 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RxrbP28704 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RxrbP28704 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RxrbP28704 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RxrbP28704 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RxrbP28704 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.87■□□□□ 0.77
RxrbP28704 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms