Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ApoeP08226 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ApoeP08226 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ApoeP08226 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ApoeP08226 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
ApoeP08226 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ApoeP08226 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.7■□□□□ 0.58
ApoeP08226 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ApoeP08226 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.69■□□□□ 0.58
ApoeP08226 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
ApoeP08226 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ApoeP08226 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ApoeP08226 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ApoeP08226 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ApoeP08226 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.68■□□□□ 0.58
ApoeP08226 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.68■□□□□ 0.58
ApoeP08226 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.68■□□□□ 0.58
ApoeP08226 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.68■□□□□ 0.58
ApoeP08226 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ApoeP08226 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.68■□□□□ 0.58
ApoeP08226 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ApoeP08226 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ApoeP08226 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ApoeP08226 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.66■□□□□ 0.58
ApoeP08226 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ApoeP08226 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.65■□□□□ 0.58
ApoeP08226 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.65■□□□□ 0.58
ApoeP08226 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.65■□□□□ 0.58
ApoeP08226 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
ApoeP08226 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ApoeP08226 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ApoeP08226 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.65■□□□□ 0.58
ApoeP08226 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ApoeP08226 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ApoeP08226 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ApoeP08226 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.64■□□□□ 0.57
ApoeP08226 Gm10399-202ENSMUST00000202768 748 ntBASIC18.64■□□□□ 0.57
ApoeP08226 Gm45444-201ENSMUST00000211394 898 ntBASIC18.64■□□□□ 0.57
ApoeP08226 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.64■□□□□ 0.57
ApoeP08226 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ApoeP08226 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.64■□□□□ 0.57
ApoeP08226 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ApoeP08226 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ApoeP08226 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ApoeP08226 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ApoeP08226 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.63■□□□□ 0.57
ApoeP08226 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms