Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
P06344 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
P06344 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.69■□□□□ 0.42
P06344 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
P06344 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
P06344 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P06344 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P06344 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.67■□□□□ 0.42
P06344 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P06344 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.67■□□□□ 0.42
P06344 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P06344 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
P06344 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.66■□□□□ 0.42
P06344 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
P06344 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.66■□□□□ 0.42
P06344 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06344 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.65■□□□□ 0.42
P06344 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.65■□□□□ 0.42
P06344 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06344 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
P06344 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.64■□□□□ 0.41
P06344 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.64■□□□□ 0.41
P06344 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06344 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
P06344 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.63■□□□□ 0.41
P06344 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.63■□□□□ 0.41
P06344 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06344 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P06344 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
P06344 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.62■□□□□ 0.41
P06344 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P06344 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
P06344 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06344 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
P06344 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.61■□□□□ 0.41
P06344 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
P06344 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.61■□□□□ 0.41
P06344 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.61■□□□□ 0.41
P06344 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
P06344 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P06344 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
P06344 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P06344 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P06344 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.6■□□□□ 0.41
P06344 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
P06344 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06344 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms