Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Krt1P04104 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.73■□□□□ 0.59
Krt1P04104 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Krt1P04104 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.73■□□□□ 0.59
Krt1P04104 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Krt1P04104 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Krt1P04104 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt1P04104 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.72■□□□□ 0.59
Krt1P04104 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt1P04104 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.72■□□□□ 0.59
Krt1P04104 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Krt1P04104 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Krt1P04104 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Krt1P04104 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt1P04104 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt1P04104 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Krt1P04104 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.7■□□□□ 0.58
Krt1P04104 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Krt1P04104 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Krt1P04104 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.7■□□□□ 0.58
Krt1P04104 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.7■□□□□ 0.58
Krt1P04104 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt1P04104 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.69■□□□□ 0.58
Krt1P04104 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Krt1P04104 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.69■□□□□ 0.58
Krt1P04104 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt1P04104 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt1P04104 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt1P04104 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Krt1P04104 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt1P04104 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Krt1P04104 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Krt1P04104 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Krt1P04104 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Krt1P04104 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt1P04104 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.66■□□□□ 0.58
Krt1P04104 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
Krt1P04104 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Krt1P04104 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms