Protein–RNA interactions for Protein: P01867

Igh-3, Ig gamma-2B chain C region, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-3P01867 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igh-3P01867 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.35■□□□□ 0.37
Igh-3P01867 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Igh-3P01867 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igh-3P01867 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.35■□□□□ 0.37
Igh-3P01867 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igh-3P01867 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igh-3P01867 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Igh-3P01867 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Igh-3P01867 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Gm43173-201ENSMUST00000202246 593 ntBASIC17.34■□□□□ 0.37
Igh-3P01867 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igh-3P01867 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igh-3P01867 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Igh-3P01867 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igh-3P01867 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igh-3P01867 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.33■□□□□ 0.37
Igh-3P01867 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Igh-3P01867 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.33■□□□□ 0.36
Igh-3P01867 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Igh-3P01867 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igh-3P01867 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Igh-3P01867 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.32■□□□□ 0.36
Igh-3P01867 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.32■□□□□ 0.36
Igh-3P01867 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Igh-3P01867 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Igh-3P01867 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igh-3P01867 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Igh-3P01867 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.31■□□□□ 0.36
Igh-3P01867 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Igh-3P01867 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.31■□□□□ 0.36
Igh-3P01867 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.31■□□□□ 0.36
Igh-3P01867 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Igh-3P01867 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Igh-3P01867 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igh-3P01867 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Igh-3P01867 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Igh-3P01867 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Igh-3P01867 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.3■□□□□ 0.36
Igh-3P01867 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Igh-3P01867 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Igh-3P01867 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-3P01867 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-3P01867 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Igh-3P01867 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Igh-3P01867 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.28■□□□□ 0.36
Igh-3P01867 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.28■□□□□ 0.36
Igh-3P01867 Gm8493-201ENSMUST00000196881 489 ntBASIC17.28■□□□□ 0.36
Igh-3P01867 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-3P01867 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-3P01867 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-3P01867 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Igh-3P01867 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.27■□□□□ 0.36
Igh-3P01867 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Igh-3P01867 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms