Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P01800 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01800 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P01800 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P01800 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
P01800 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01800 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.3■□□□□ 0.36
P01800 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01800 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.29■□□□□ 0.36
P01800 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
P01800 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01800 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
P01800 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.28■□□□□ 0.36
P01800 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
P01800 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01800 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P01800 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01800 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01800 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01800 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01800 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P01800 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01800 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
P01800 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.27■□□□□ 0.36
P01800 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01800 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01800 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.26■□□□□ 0.35
P01800 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
P01800 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01800 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01800 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01800 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01800 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01800 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
P01800 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.24■□□□□ 0.35
P01800 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.24■□□□□ 0.35
P01800 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01800 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.24■□□□□ 0.35
P01800 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
P01800 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
P01800 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.23■□□□□ 0.35
P01800 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.23■□□□□ 0.35
P01800 Gm7417-201ENSMUST00000192950 473 ntBASIC17.23■□□□□ 0.35
P01800 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.23■□□□□ 0.35
P01800 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01800 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01800 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01800 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01800 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01800 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01800 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms