Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ifna1P01572 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.68■□□□□ 0.26
Ifna1P01572 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.68■□□□□ 0.26
Ifna1P01572 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.68■□□□□ 0.26
Ifna1P01572 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ifna1P01572 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ifna1P01572 Mir6538-201ENSMUST00000183713 110 ntBASIC16.67■□□□□ 0.26
Ifna1P01572 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ifna1P01572 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ifna1P01572 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.66■□□□□ 0.26
Ifna1P01572 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.66■□□□□ 0.26
Ifna1P01572 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Ifna1P01572 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifna1P01572 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.66■□□□□ 0.26
Ifna1P01572 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ifna1P01572 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.65■□□□□ 0.26
Ifna1P01572 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Ifna1P01572 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.65■□□□□ 0.26
Ifna1P01572 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.65■□□□□ 0.26
Ifna1P01572 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifna1P01572 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ifna1P01572 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Ifna1P01572 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ifna1P01572 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ifna1P01572 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ifna1P01572 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.64■□□□□ 0.25
Ifna1P01572 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ifna1P01572 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.63■□□□□ 0.25
Ifna1P01572 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ifna1P01572 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.63■□□□□ 0.25
Ifna1P01572 Gm45444-201ENSMUST00000211394 898 ntBASIC16.63■□□□□ 0.25
Ifna1P01572 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ifna1P01572 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.63■□□□□ 0.25
Ifna1P01572 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ifna1P01572 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.63■□□□□ 0.25
Ifna1P01572 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ifna1P01572 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.62■□□□□ 0.25
Ifna1P01572 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ifna1P01572 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ifna1P01572 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ifna1P01572 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.62■□□□□ 0.25
Ifna1P01572 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ifna1P01572 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ifna1P01572 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms