Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hcn3O88705 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.93■□□□□ 0.62
Hcn3O88705 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn3O88705 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn3O88705 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.92■□□□□ 0.62
Hcn3O88705 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn3O88705 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hcn3O88705 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hcn3O88705 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Hcn3O88705 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn3O88705 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn3O88705 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hcn3O88705 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Hcn3O88705 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn3O88705 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Hcn3O88705 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
Hcn3O88705 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hcn3O88705 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
Hcn3O88705 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn3O88705 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn3O88705 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Hcn3O88705 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hcn3O88705 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hcn3O88705 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.89■□□□□ 0.61
Hcn3O88705 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.89■□□□□ 0.61
Hcn3O88705 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Hcn3O88705 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn3O88705 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn3O88705 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.88■□□□□ 0.61
Hcn3O88705 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.88■□□□□ 0.61
Hcn3O88705 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Hcn3O88705 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.88■□□□□ 0.61
Hcn3O88705 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn3O88705 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn3O88705 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn3O88705 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.87■□□□□ 0.61
Hcn3O88705 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn3O88705 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hcn3O88705 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.86■□□□□ 0.61
Hcn3O88705 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hcn3O88705 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hcn3O88705 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.86■□□□□ 0.61
Hcn3O88705 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn3O88705 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn3O88705 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn3O88705 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn3O88705 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.85■□□□□ 0.61
Hcn3O88705 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Hcn3O88705 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hcn3O88705 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn3O88705 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn3O88705 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms