Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.88■□□□□ 0.61
Hcn1O88704 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.88■□□□□ 0.61
Hcn1O88704 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Hcn1O88704 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.88■□□□□ 0.61
Hcn1O88704 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Hcn1O88704 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.87■□□□□ 0.61
Hcn1O88704 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.87■□□□□ 0.61
Hcn1O88704 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hcn1O88704 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.87■□□□□ 0.61
Hcn1O88704 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Hcn1O88704 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcn1O88704 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hcn1O88704 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hcn1O88704 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hcn1O88704 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.85■□□□□ 0.61
Hcn1O88704 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcn1O88704 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hcn1O88704 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hcn1O88704 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn1O88704 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn1O88704 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
Hcn1O88704 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn1O88704 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn1O88704 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.84■□□□□ 0.61
Hcn1O88704 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.84■□□□□ 0.61
Hcn1O88704 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn1O88704 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn1O88704 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn1O88704 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn1O88704 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Hcn1O88704 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn1O88704 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Hcn1O88704 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hcn1O88704 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Hcn1O88704 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hcn1O88704 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.82■□□□□ 0.6
Hcn1O88704 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hcn1O88704 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn1O88704 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.81■□□□□ 0.6
Hcn1O88704 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hcn1O88704 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.81■□□□□ 0.6
Hcn1O88704 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn1O88704 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hcn1O88704 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms