Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc28a2O88627 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc28a2O88627 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Slc28a2O88627 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc28a2O88627 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc28a2O88627 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc28a2O88627 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.55■□□□□ 0.4
Slc28a2O88627 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc28a2O88627 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc28a2O88627 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Slc28a2O88627 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc28a2O88627 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slc28a2O88627 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.54■□□□□ 0.4
Slc28a2O88627 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc28a2O88627 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.53■□□□□ 0.4
Slc28a2O88627 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc28a2O88627 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc28a2O88627 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc28a2O88627 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc28a2O88627 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.52■□□□□ 0.4
Slc28a2O88627 Gm7417-201ENSMUST00000192950 473 ntBASIC17.52■□□□□ 0.4
Slc28a2O88627 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc28a2O88627 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Slc28a2O88627 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc28a2O88627 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Slc28a2O88627 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc28a2O88627 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 Etf1-202ENSMUST00000180351 108 ntBASIC17.51■□□□□ 0.39
Slc28a2O88627 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.51■□□□□ 0.39
Slc28a2O88627 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc28a2O88627 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc28a2O88627 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc28a2O88627 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.5■□□□□ 0.39
Slc28a2O88627 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc28a2O88627 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc28a2O88627 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc28a2O88627 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc28a2O88627 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Slc28a2O88627 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc28a2O88627 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc28a2O88627 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc28a2O88627 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc28a2O88627 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.49■□□□□ 0.39
Slc28a2O88627 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc28a2O88627 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.48■□□□□ 0.39
Slc28a2O88627 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Slc28a2O88627 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.48■□□□□ 0.39
Slc28a2O88627 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc28a2O88627 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms