Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn2O88552 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.29■□□□□ 0.84
Cldn2O88552 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cldn2O88552 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cldn2O88552 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn2O88552 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn2O88552 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.28■□□□□ 0.84
Cldn2O88552 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.28■□□□□ 0.84
Cldn2O88552 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Cldn2O88552 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn2O88552 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn2O88552 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn2O88552 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.84
Cldn2O88552 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn2O88552 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.27■□□□□ 0.84
Cldn2O88552 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn2O88552 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn2O88552 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn2O88552 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Cldn2O88552 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn2O88552 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Cldn2O88552 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn2O88552 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cldn2O88552 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn2O88552 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.25■□□□□ 0.83
Cldn2O88552 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn2O88552 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn2O88552 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldn2O88552 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.24■□□□□ 0.83
Cldn2O88552 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.24■□□□□ 0.83
Cldn2O88552 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.24■□□□□ 0.83
Cldn2O88552 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Cldn2O88552 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn2O88552 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
Cldn2O88552 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cldn2O88552 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cldn2O88552 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.23■□□□□ 0.83
Cldn2O88552 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.23■□□□□ 0.83
Cldn2O88552 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn2O88552 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.22■□□□□ 0.83
Cldn2O88552 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn2O88552 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn2O88552 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.22■□□□□ 0.83
Cldn2O88552 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.22■□□□□ 0.83
Cldn2O88552 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Cldn2O88552 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn2O88552 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn2O88552 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn2O88552 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Gm13234-201ENSMUST00000120010 747 ntBASIC20.21■□□□□ 0.83
Cldn2O88552 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.21■□□□□ 0.83
Cldn2O88552 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn2O88552 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn2O88552 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn2O88552 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.2■□□□□ 0.82
Cldn2O88552 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn2O88552 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn2O88552 Gm27801-201ENSMUST00000184174 223 ntBASIC20.2■□□□□ 0.82
Cldn2O88552 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn2O88552 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms