Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.97■□□□□ 0.95
Pja1O55176 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pja1O55176 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pja1O55176 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pja1O55176 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pja1O55176 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.96■□□□□ 0.95
Pja1O55176 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pja1O55176 Mir6236-201ENSMUST00000184437 123 ntBASIC20.96■□□□□ 0.95
Pja1O55176 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.96■□□□□ 0.95
Pja1O55176 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pja1O55176 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pja1O55176 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.96■□□□□ 0.95
Pja1O55176 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Pja1O55176 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pja1O55176 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pja1O55176 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pja1O55176 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pja1O55176 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.94■□□□□ 0.94
Pja1O55176 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pja1O55176 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pja1O55176 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pja1O55176 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.93■□□□□ 0.94
Pja1O55176 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
Pja1O55176 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pja1O55176 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pja1O55176 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pja1O55176 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.92■□□□□ 0.94
Pja1O55176 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pja1O55176 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.92■□□□□ 0.94
Pja1O55176 Gm43530-201ENSMUST00000195920 274 ntBASIC20.92■□□□□ 0.94
Pja1O55176 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pja1O55176 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pja1O55176 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Pja1O55176 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.91■□□□□ 0.94
Pja1O55176 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pja1O55176 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pja1O55176 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pja1O55176 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pja1O55176 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pja1O55176 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.9■□□□□ 0.94
Pja1O55176 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.9■□□□□ 0.94
Pja1O55176 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pja1O55176 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.9■□□□□ 0.94
Pja1O55176 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pja1O55176 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pja1O55176 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Pja1O55176 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Pja1O55176 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.89■□□□□ 0.93
Pja1O55176 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.89■□□□□ 0.93
Pja1O55176 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.89■□□□□ 0.93
Pja1O55176 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.89■□□□□ 0.93
Pja1O55176 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pja1O55176 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pja1O55176 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pja1O55176 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pja1O55176 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.88■□□□□ 0.93
Pja1O55176 Gm9870-201ENSMUST00000063874 645 ntBASIC20.88■□□□□ 0.93
Pja1O55176 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.88■□□□□ 0.93
Pja1O55176 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pja1O55176 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms