Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pde6dO55057 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pde6dO55057 Gm8503-201ENSMUST00000118131 455 ntBASIC15.61■□□□□ 0.09
Pde6dO55057 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pde6dO55057 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pde6dO55057 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pde6dO55057 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pde6dO55057 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pde6dO55057 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.6■□□□□ 0.09
Pde6dO55057 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.6■□□□□ 0.09
Pde6dO55057 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Pde6dO55057 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pde6dO55057 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Golph3-205ENSMUST00000228671 2842 ntBASIC15.6■□□□□ 0.09
Pde6dO55057 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pde6dO55057 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.6■□□□□ 0.09
Pde6dO55057 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pde6dO55057 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Gm11599-201ENSMUST00000118720 878 ntBASIC15.59■□□□□ 0.09
Pde6dO55057 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.59■□□□□ 0.09
Pde6dO55057 Gm7432-201ENSMUST00000210343 879 ntBASIC15.59■□□□□ 0.09
Pde6dO55057 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.59■□□□□ 0.09
Pde6dO55057 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Pde6dO55057 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pde6dO55057 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pde6dO55057 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Pde6dO55057 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pde6dO55057 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pde6dO55057 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pde6dO55057 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pde6dO55057 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.58■□□□□ 0.08
Pde6dO55057 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Pde6dO55057 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pde6dO55057 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Pde6dO55057 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pde6dO55057 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pde6dO55057 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pde6dO55057 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pde6dO55057 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pde6dO55057 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms