Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl13O55038 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl13O55038 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cxcl13O55038 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cxcl13O55038 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cxcl13O55038 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Cxcl13O55038 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.83■□□□□ 0.28
Cxcl13O55038 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cxcl13O55038 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl13O55038 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl13O55038 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl13O55038 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Cxcl13O55038 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl13O55038 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl13O55038 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl13O55038 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl13O55038 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.82■□□□□ 0.28
Cxcl13O55038 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl13O55038 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl13O55038 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cxcl13O55038 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl13O55038 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl13O55038 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl13O55038 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.82■□□□□ 0.28
Cxcl13O55038 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl13O55038 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl13O55038 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cxcl13O55038 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl13O55038 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.81■□□□□ 0.28
Cxcl13O55038 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl13O55038 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl13O55038 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cxcl13O55038 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Gm42642-201ENSMUST00000200683 355 ntBASIC16.8■□□□□ 0.28
Cxcl13O55038 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl13O55038 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl13O55038 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl13O55038 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl13O55038 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.78■□□□□ 0.28
Cxcl13O55038 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.78■□□□□ 0.28
Cxcl13O55038 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.77■□□□□ 0.28
Cxcl13O55038 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl13O55038 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl13O55038 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl13O55038 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcl13O55038 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl13O55038 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcl13O55038 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl13O55038 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl13O55038 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl13O55038 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl13O55038 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl13O55038 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cxcl13O55038 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl13O55038 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms