Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Banf1O54962 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.17■□□□□ 0.82
Banf1O54962 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Banf1O54962 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Banf1O54962 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Banf1O54962 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Banf1O54962 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.16■□□□□ 0.82
Banf1O54962 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Banf1O54962 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Banf1O54962 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Banf1O54962 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Banf1O54962 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.15■□□□□ 0.82
Banf1O54962 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Banf1O54962 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Banf1O54962 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Banf1O54962 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Banf1O54962 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.14■□□□□ 0.81
Banf1O54962 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Banf1O54962 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.14■□□□□ 0.81
Banf1O54962 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Banf1O54962 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.13■□□□□ 0.81
Banf1O54962 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Banf1O54962 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.13■□□□□ 0.81
Banf1O54962 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.13■□□□□ 0.81
Banf1O54962 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Banf1O54962 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.13■□□□□ 0.81
Banf1O54962 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Banf1O54962 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Banf1O54962 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Banf1O54962 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Banf1O54962 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Banf1O54962 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Banf1O54962 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Banf1O54962 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Banf1O54962 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Banf1O54962 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Banf1O54962 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Banf1O54962 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Banf1O54962 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
Banf1O54962 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Banf1O54962 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.1■□□□□ 0.81
Banf1O54962 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Banf1O54962 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Banf1O54962 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.1■□□□□ 0.81
Banf1O54962 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Banf1O54962 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Banf1O54962 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Banf1O54962 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Banf1O54962 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Banf1O54962 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Banf1O54962 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.09■□□□□ 0.81
Banf1O54962 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Banf1O54962 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Banf1O54962 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Banf1O54962 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Banf1O54962 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Banf1O54962 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Banf1O54962 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.08■□□□□ 0.81
Banf1O54962 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Banf1O54962 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.08■□□□□ 0.81
Banf1O54962 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms