Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.97■□□□□ 0.63
Abca4O35600 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Abca4O35600 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.96■□□□□ 0.63
Abca4O35600 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.96■□□□□ 0.63
Abca4O35600 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.96■□□□□ 0.63
Abca4O35600 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Abca4O35600 Gm11249-201ENSMUST00000117071 859 ntBASIC18.95■□□□□ 0.62
Abca4O35600 Gm6433-201ENSMUST00000118634 875 ntBASIC18.95■□□□□ 0.62
Abca4O35600 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Abca4O35600 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Abca4O35600 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Abca4O35600 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Abca4O35600 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Abca4O35600 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.95■□□□□ 0.62
Abca4O35600 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Abca4O35600 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abca4O35600 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Abca4O35600 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abca4O35600 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abca4O35600 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.93■□□□□ 0.62
Abca4O35600 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.93■□□□□ 0.62
Abca4O35600 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.93■□□□□ 0.62
Abca4O35600 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abca4O35600 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Abca4O35600 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Abca4O35600 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.92■□□□□ 0.62
Abca4O35600 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.92■□□□□ 0.62
Abca4O35600 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abca4O35600 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.92■□□□□ 0.62
Abca4O35600 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abca4O35600 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Abca4O35600 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Abca4O35600 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.92■□□□□ 0.62
Abca4O35600 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abca4O35600 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.91■□□□□ 0.62
Abca4O35600 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.91■□□□□ 0.62
Abca4O35600 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abca4O35600 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.9■□□□□ 0.62
Abca4O35600 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.9■□□□□ 0.62
Abca4O35600 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abca4O35600 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.89■□□□□ 0.62
Abca4O35600 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Abca4O35600 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Abca4O35600 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Abca4O35600 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Abca4O35600 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Gm10231-201ENSMUST00000181584 441 ntBASIC18.89■□□□□ 0.61
Abca4O35600 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Gm10175-202ENSMUST00000208752 441 ntBASIC18.89■□□□□ 0.61
Abca4O35600 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abca4O35600 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.88■□□□□ 0.61
Abca4O35600 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.88■□□□□ 0.61
Abca4O35600 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Abca4O35600 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Abca4O35600 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Abca4O35600 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Dio3-201ENSMUST00000097228 1449 ntBASIC18.88■□□□□ 0.61
Abca4O35600 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Abca4O35600 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Abca4O35600 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.88■□□□□ 0.61
Abca4O35600 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abca4O35600 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms