Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11aO35305 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11aO35305 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf11aO35305 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Gm27454-201ENSMUST00000185090 204 ntBASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.45■■□□□ 1.02
Tnfrsf11aO35305 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.44■■□□□ 1.02
Tnfrsf11aO35305 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Tnfrsf11aO35305 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 Gm12251-201ENSMUST00000117893 792 ntBASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf11aO35305 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Notumos-201ENSMUST00000151998 2659 ntBASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11aO35305 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11aO35305 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf11aO35305 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.39■■□□□ 1.02
Tnfrsf11aO35305 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf11aO35305 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Tnfrsf11aO35305 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Gm45417-201ENSMUST00000209533 758 ntBASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Tnfrsf11aO35305 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Golph3-202ENSMUST00000226517 2359 ntBASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf11aO35305 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Gm12821-201ENSMUST00000120022 600 ntBASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11aO35305 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11aO35305 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms