Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.55■□□□□ 0.56
Cx3cl1O35188 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.55■□□□□ 0.56
Cx3cl1O35188 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cx3cl1O35188 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cx3cl1O35188 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.53■□□□□ 0.56
Cx3cl1O35188 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cx3cl1O35188 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cx3cl1O35188 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cx3cl1O35188 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cx3cl1O35188 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Mir7075-201ENSMUST00000184187 82 ntBASIC18.52■□□□□ 0.56
Cx3cl1O35188 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cx3cl1O35188 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cx3cl1O35188 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cx3cl1O35188 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cx3cl1O35188 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cl1O35188 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cl1O35188 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.49■□□□□ 0.55
Cx3cl1O35188 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.49■□□□□ 0.55
Cx3cl1O35188 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.49■□□□□ 0.55
Cx3cl1O35188 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cx3cl1O35188 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.48■□□□□ 0.55
Cx3cl1O35188 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.48■□□□□ 0.55
Cx3cl1O35188 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.48■□□□□ 0.55
Cx3cl1O35188 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms