Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Gm29257-201ENSMUST00000186115 639 ntBASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34bJ3QNR8 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34bJ3QNR8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Gm9988-201ENSMUST00000069786 435 ntBASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34bJ3QNR8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 AV356131-201ENSMUST00000206201 750 ntBASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34bJ3QNR8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim34bJ3QNR8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Trim34bJ3QNR8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Gm27801-201ENSMUST00000184174 223 ntBASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34bJ3QNR8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.31■■□□□ 1.48
Trim34bJ3QNR8 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.31■■□□□ 1.48
Trim34bJ3QNR8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim34bJ3QNR8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34bJ3QNR8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34bJ3QNR8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34bJ3QNR8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34bJ3QNR8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Gm37179-201ENSMUST00000194862 823 ntBASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34bJ3QNR8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Trim34bJ3QNR8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34bJ3QNR8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms