Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Gm32051-202ENSMUST00000197905 2385 ntBASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc179J3QM76 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc179J3QM76 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc179J3QM76 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc179J3QM76 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Rps24-207ENSMUST00000224568 714 ntBASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc179J3QM76 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc179J3QM76 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms